dc.contributor.author | Casimiro Soriguer, Carlos S. | |
dc.contributor.author | Pedrosa Corral, Irene | |
dc.contributor.author | Guillot Sulay, Vicente | |
dc.contributor.author | Martínez González, Luis Javier | |
dc.contributor.author | Navarro Marí, José María | |
dc.contributor.author | Sanbonmatsu Gámez, Sara | |
dc.date.accessioned | 2021-06-11T10:29:06Z | |
dc.date.available | 2021-06-11T10:29:06Z | |
dc.date.issued | 2021-05-05 | |
dc.identifier.citation | Casimiro-Soriguer, C.S.; Perez-Florido, J.; Fernandez-Rueda, J.L.; Pedrosa-Corral, I.; Guillot-Sulay, V.; Lorusso, N.; Martinez-Gonzalez, L.J.; Navarro-Marí, J.M.; Dopazo, J.; Sanbonmatsu-Gámez, S. Phylogenetic Analysis of the 2020West Nile Virus (WNV) Outbreak in Andalusia (Spain). Viruses 2021, 13, 836. [https://doi.org/10.3390/v13050836] | es_ES |
dc.identifier.uri | http://hdl.handle.net/10481/69128 | |
dc.description | This research was funded by grants PT17/0009/0006 from the ISCIII, co-funded by the European Regional Development Fund (ERDF) as well as H2020 "ELIXIR-EXCELERATE fast-track ELIXIR implementation and drive early user exploitation across the life sciences" (GA 676559). | es_ES |
dc.description.abstract | During recent decades West Nile Virus (WNV) outbreaks have continuously occurred in the Mediterranean area. In August 2020 a new WNV outbreak affected 71 people with meningoencephalitis in Andalusia and six more cases were detected in Extremadura (south-west of Spain), causing a total of eight deaths. The whole genomes of four viruses were obtained and phylogenetically analyzed in the context of recent outbreaks. The Andalusian viral samples belonged to lineage 1 and were relatively similar to those of previous outbreaks which occurred in the Mediterranean region. Here we present a detailed analysis of the outbreak, including an extensive phylogenetic study. As part on this effort, we implemented a local Nextstrain server, which has become a constituent piece of regional epidemiological surveillance, wherein forthcoming genomes of environmental samples or, eventually, future outbreaks, will be included. | es_ES |
dc.description.sponsorship | Instituto de Salud Carlos III
PT17/0009/0006 | es_ES |
dc.description.sponsorship | European Commission | es_ES |
dc.description.sponsorship | H2020 "ELIXIR-EXCELERATE fast-track ELIXIR implementation and drive early user exploitation across the life sciences"
676559 | es_ES |
dc.language.iso | eng | es_ES |
dc.publisher | MDPI | es_ES |
dc.rights | Atribución 3.0 España | * |
dc.rights.uri | http://creativecommons.org/licenses/by/3.0/es/ | * |
dc.subject | West Nile Virus | es_ES |
dc.subject | Outbreak | es_ES |
dc.subject | Meningoencephalitis | es_ES |
dc.subject | Epidemiology | es_ES |
dc.subject | Phylogeny | es_ES |
dc.subject | Whole genome sequencing | es_ES |
dc.title | Phylogenetic Analysis of the 2020 West Nile Virus (WNV) Outbreak in Andalusia (Spain) | es_ES |
dc.type | journal article | es_ES |
dc.relation.projectID | info:eu-repo/grantAgreement/EC/H2020/676559 | es_ES |
dc.rights.accessRights | open access | es_ES |
dc.identifier.doi | 10.3390/v13050836 | |
dc.type.hasVersion | VoR | es_ES |