<rdf:RDF xmlns:rdf="http://www.openarchives.org/OAI/2.0/rdf/" xmlns:ow="http://www.ontoweb.org/ontology/1#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:ds="http://dspace.org/ds/elements/1.1/" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xmlns:doc="http://www.lyncode.com/xoai" xsi:schemaLocation="http://www.openarchives.org/OAI/2.0/rdf/ http://www.openarchives.org/OAI/2.0/rdf.xsd">
   <ow:Publication rdf:about="oai:digibug.ugr.es:10481/69128">
      <dc:title>Phylogenetic Analysis of the 2020 West Nile Virus (WNV) Outbreak in Andalusia (Spain)</dc:title>
      <dc:creator>Casimiro Soriguer, Carlos S.</dc:creator>
      <dc:creator>Pedrosa Corral, Irene</dc:creator>
      <dc:creator>Guillot Sulay, Vicente</dc:creator>
      <dc:creator>Martínez González, Luis Javier</dc:creator>
      <dc:creator>Navarro Marí, José María</dc:creator>
      <dc:creator>Sanbonmatsu Gámez, Sara</dc:creator>
      <dc:subject>West Nile Virus</dc:subject>
      <dc:subject>Outbreak</dc:subject>
      <dc:subject>Meningoencephalitis</dc:subject>
      <dc:subject>Epidemiology</dc:subject>
      <dc:subject>Phylogeny</dc:subject>
      <dc:subject>Whole genome sequencing</dc:subject>
      <dc:description>This research was funded by grants PT17/0009/0006 from the ISCIII, co-funded by the European Regional Development Fund (ERDF) as well as H2020 "ELIXIR-EXCELERATE fast-track ELIXIR implementation and drive early user exploitation across the life sciences" (GA 676559).</dc:description>
      <dc:description>During recent decades West Nile Virus (WNV) outbreaks have continuously occurred in the Mediterranean area. In August 2020 a new WNV outbreak affected 71 people with meningoencephalitis in Andalusia and six more cases were detected in Extremadura (south-west of Spain), causing a total of eight deaths. The whole genomes of four viruses were obtained and phylogenetically analyzed in the context of recent outbreaks. The Andalusian viral samples belonged to lineage 1 and were relatively similar to those of previous outbreaks which occurred in the Mediterranean region. Here we present a detailed analysis of the outbreak, including an extensive phylogenetic study. As part on this effort, we implemented a local Nextstrain server, which has become a constituent piece of regional epidemiological surveillance, wherein forthcoming genomes of environmental samples or, eventually, future outbreaks, will be included.</dc:description>
      <dc:date>2021-06-11T10:29:06Z</dc:date>
      <dc:date>2021-06-11T10:29:06Z</dc:date>
      <dc:date>2021-05-05</dc:date>
      <dc:type>info:eu-repo/semantics/article</dc:type>
      <dc:identifier>Casimiro-Soriguer, C.S.; Perez-Florido, J.; Fernandez-Rueda, J.L.; Pedrosa-Corral, I.; Guillot-Sulay, V.; Lorusso, N.; Martinez-Gonzalez, L.J.; Navarro-Marí, J.M.; Dopazo, J.; Sanbonmatsu-Gámez, S. Phylogenetic Analysis of the 2020West Nile Virus (WNV) Outbreak in Andalusia (Spain). Viruses 2021, 13, 836. [https://doi.org/10.3390/v13050836]</dc:identifier>
      <dc:identifier>http://hdl.handle.net/10481/69128</dc:identifier>
      <dc:identifier>10.3390/v13050836</dc:identifier>
      <dc:language>eng</dc:language>
      <dc:relation>info:eu-repo/grantAgreement/EC/H2020/676559</dc:relation>
      <dc:rights>http://creativecommons.org/licenses/by/3.0/es/</dc:rights>
      <dc:rights>info:eu-repo/semantics/openAccess</dc:rights>
      <dc:rights>Atribución 3.0 España</dc:rights>
      <dc:publisher>MDPI</dc:publisher>
   </ow:Publication>
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