A Comparative Study of Stochastic Optimizers for Fitting Neuron Models. Application to the Cerebellar Granule Cell
Identificadores
URI: https://hdl.handle.net/10481/109078DOI: 10.15388/21-INFOR450
ISSN: 0868-4952
ISSN: 1822-8844
Metadatos
Mostrar el registro completo del ítemAutor
Calvo Cruz, Nicolás; Marín Alejo, Milagros; López Redondo, Juana; Martínez Ortigosa, Eva; Martínez Ortigosa, PilarEditorial
Vilnius University
Materia
Granule cell Neuron model Model tuning
Fecha
2021-04-12Referencia bibliográfica
Cruz, N. C., Marín, M., Redondo, J. L., Ortigosa, E. M., Ortigosa, P. M. A comparative study of stochastic optimizers for fitting neuron models. Application to the cerebellar granule cell. Informatica, 32(3), 477-498 (2021). https://doi.org/10.15388/21-INFOR450
Patrocinador
Human Brain Project Specific Grant Agreement 3 (H2020-RIA. 945539); Spanish Ministry of Economy and Competitiveness (RTI2018-095993-B-I00); National Grant INTSENSO (MICINN-FEDER-PID2019-109991GB-I00); Junta de Andalucía (FEDER-JA P18-FR-2378, P18-RT-1193); University of Almería (UAL18-TIC-A020-B)Resumen
This work compares different algorithms to replace the genetic optimizer used in a recent methodology for creating realistic and computationally efficient neuron models. That method focuses on single-neuron processing and has been applied to cerebellar granule cells. It relies on the adaptive-exponential integrate-and-fire (AdEx) model, which must be adjusted with experimental data. The alternatives considered are: i) a memetic extension of the original genetic method, ii) Differential Evolution, iii) Teaching-Learning-Based Optimization, and iv) a local optimizer within a multi-start procedure. All of them ultimately outperform the original method, and the last two do it in all the scenarios considered.





